Publication list

  • Casper H. L. Beentjes, Ruben Perez-Carrasco, Ramon Grima
    Exact solution of stochastic gene expression models with bursting, cell cycle and replication dynamics
    preprint (2019)
  • Içvara Barbier, Ruben Perez-Carrasco*, Yolanda Schaerli
    Controlling spatiotemporal pattern formation in a concentration gradient with a synthetic toggle switch
    preprint (2019)
  • Nuria Folguera-Blasco, Ruben Perez-Carrasco, Elisabet Cuyas, Javier A Menendez, Tomas Alarcon
    A multiscale model of epigenetic heterogeneity reveals the kinetic routes of pathologicalcell fate reprogramming. PLoS Comp. Bio. accepted
    PLoS Comp. Bio. (2019)

  • Pilar Guerrero, Ruben Perez-Carrasco, Marcin Zagorski, David Page, Anna Kicheva, James Briscoe, Karen M. Page
    Neuronal differentiation affects tissue mechanics and progenitor arrangement in the vertebrate neuroepithelium
    Development (2019)
  • Roberto de la Cruz, Ruben Perez-Carrasco*, Pilar Guerrero, Tomas Alarcon, Karen M. Page
    Phys. Rev. Lett. (2019)
  • Karen M. Page, Ruben Perez-Carrasco*
    Degradation rate uniformity determines success of oscillations in repressive feedback regulatory networks
    J. Royal.Soc. Interface (2018)
  • Ruben Perez-Carrasco, Chris P. Barnes, Yolanda Schaerli, Mark Isalan, James Briscoe, Karen M. Page
    The power of the AC-DC circuit: Operating principles of a simple multi-functional transcriptional network motif
    Cell Systems (2018)
  • Roberto de la Cruz, Ruben Perez-Carrasco*, Pilar Guerrero, Tomas Alarcon, Karen M. Page
    Minimum Action Path theory reveals the details of stochastic biochemical transitions out of oscillatory cellular states
    Phys. Rev. Lett. (2018)
  • Edgar Herrera-Delgado, Ruben Perez-Carrasco, James Briscoe, Peter Sollich
    Memory effects in gene regulatory networks reveal key properties of dynamical spatial patterning
    Plos Comp. Biol. (2018)
  • Ashley L NordEmilie GachonRuben Perez-CarrascoJasmine A NirodyAlessandro BarducciRichard M BerryFrancesco Pedaci
    A catch-bond drives stator mechanosensitivity in the Bacterial Flagellar Motor
    PNAS  (2017)
  • R. Perez-Carrasco, P. Guerrero, J. Briscoe, K. Page
    Intrinsic noise profoundly alters the dynamics and steady state of morphogen-controlled bistable genetic switches
    PLoS Comp. Biol. (2016)
  • M. Cohen, K.M. Page, R. Perez-Carrasco, C.P. Barnes, J. Briscoe
    Mathematical models help explain experimental data
    Development (2016)
  • M. Bodnar, P. Guerrero, R. Perez-Carrasco, M. J. Piotrowska
    Deterministic and Stochastic Study for a Microscopic Angiogenesis Model: Applications to the Lewis Lung Carcinoma
    PLoS ONE (2016)
  • M. Woods, M. Leon, R. Perez-Carrasco, C. P. Barnes
    A statistical approach reveals designs for the most robust stochastic gene oscillators
    ACS Synthetic Biology (2016)
  • M. Cohen, K. M. Page, R. Perez-Carrasco, C. P. Barnes, J. Briscoe
    A theoretical framework for the regulation of Shh morphogen-controlled gene expression
    Development (2014)
  • R. Perez-Carrasco, J.M. Sancho
    Theoretical study of a molecular turbine
    Phys. Rev. E (2013)
  • R. Perez-Carrasco, A. Fiasconaro, F. Falo, J. M. Sancho
    Modelling the mechanochemistry of the ϕ29 DNA translocation motor
    Phys. Rev. E (2012)
  • R. Perez-Carrasco, J.M. Sancho
    Molecular motors in conservative and dissipative regimes
    Phys. Rev. E (2011)
  • R. Perez-Carrasco, J.M. Sancho.
    Stochastic algorithms for discontinuous multiplicative white noise
    Phys. Rev. E (2010)